find_gg {multicrispr} | R Documentation |
Find GG
Description
Find GG
Usage
find_gg(gr)
Arguments
Value
GRanges-class
Examples
# PE example
#-----------
require(magrittr)
bsgenome <- BSgenome.Hsapiens.UCSC.hg38::BSgenome.Hsapiens.UCSC.hg38
gr <- char_to_granges(c(PRNP = 'chr20:4699600:+', # snp
HBB = 'chr11:5227002:-', # snp
HEXA = 'chr15:72346580-72346583:-', # del
CFTR = 'chr7:117559593-117559595:+'), # ins
bsgenome)
gr %<>% extend_pe_to_gg(plot = TRUE) %>% add_seq(bsgenome)
find_gg(gr)
[Package
multicrispr version 1.4.3
Index]