filterExperimentByFrequency {midasHLA} | R Documentation |
Helper function for experiments filtering
filterExperimentByFrequency( experiment, carrier_frequency = FALSE, lower_frequency_cutoff = NULL, upper_frequency_cutoff = NULL ) ## S3 method for class 'matrix' filterExperimentByFrequency( experiment, carrier_frequency = FALSE, lower_frequency_cutoff = NULL, upper_frequency_cutoff = NULL ) ## S3 method for class 'SummarizedExperiment' filterExperimentByFrequency( experiment, carrier_frequency = FALSE, lower_frequency_cutoff = NULL, upper_frequency_cutoff = NULL )
experiment |
Matrix or SummarizedExperiment object. |
carrier_frequency |
Logical flag indicating if carrier frequency should be returned. |
lower_frequency_cutoff |
Positive number or |
upper_frequency_cutoff |
Positive number or |
Filtered experiment matrix.