nmarker {microbiomeMarker} | R Documentation |
Get the number of microbiome markers
nmarker(object) ## S4 method for signature 'microbiomeMarker' nmarker(object) ## S4 method for signature 'marker_table' nmarker(object)
object |
a |
an integer, the number of microbiome markers
mt <- marker_table(data.frame( feature = c("speciesA", "speciesB"), enrich_group = c("groupA", "groupB"), ef_logFC = c(-2, 2), pvalue = c(0.01, 0.01), padj = c(0.01, 0.01), row.names = c("marker1", "marker2") )) nmarker(mt)