plotDNAmAge {methylclock} | R Documentation |
Plot DNAm age estimation vs chronological age.
plotDNAmAge(x, y, tit = "Horvath's method", clock = "chronological", ...)
x |
DNAm age estimation |
y |
Chronological age |
tit |
Plot title. Default is "Horvath's method". |
clock |
Type of clock 'chronological' or 'GA', default 'chronological' |
... |
Other plot parameters for ggplot |
Plot with estimated DNAmAge
library(tidyverse) path <- system.file("extdata", package = "methylclock") covariates <- read_csv(file.path( path, "SampleAnnotationExample55.csv" )) age <- covariates$Age MethylationData <- get_MethylationDataExample() age.example55 <- DNAmAge(MethylationData) plotDNAmAge(age.example55$Horvath, age)