commonClockCpgs {methylclock} | R Documentation |
Show the required CpGs contained on input data for the implemented clocks
commonClockCpgs(object, clock)
object |
resulting object from checkClocks functions |
clock |
string with the implemented clock, possible values are : "Knight", "Bohlin", "Mayne" and "Lee", "Horvath", "Hannum", "Levine", "skinHorvath", "PedBE", "Wu" and "TL" |
The common CpGs between input data and defined GA clock
TestDataset <- get_TestDataset() cpgs.missing.GA <- checkClocksGA(TestDataset) cpgs.missing <- checkClocks(TestDataset) commonClockCpgs(cpgs.missing.GA, "Bohlin") commonClockCpgs(cpgs.missing, "Hannum")