createOutputDir {methylInheritance}R Documentation

Create directories that will contained the results of the permutations in RDS format

Description

Create directories that will contained the results of the permutations in RDS format.

Usage

createOutputDir(
  outputDir,
  doingSites = TRUE,
  doingTiles = FALSE,
  saveInfoByGeneration
)

Arguments

outputDir

a string of character, the name of the main directory to be created.

doingSites

a logical, a directory consecrated to contain the results of the permutation analysis for sites is created when doingSites = TRUE. Default: TRUE.

doingTiles

a logical, a directory consecrated to contain the results of the permutation analysis for tiles is created when doingTiles = TRUE. Default: FALSE.

saveInfoByGeneration

a logical, when TRUE, the information about differentially methylated sites and tiles for each generation is saved in a RDS file. The information is saved in a different file for each permutation.

Value

0 when all directories are created without problem.

Author(s)

Astrid Deschenes

Examples


## Create an output directory for SITES only
methylInheritance:::createOutputDir(outputDir = "testSites",
    doingSites = TRUE, doingTiles = FALSE, saveInfoByGeneration = TRUE)


[Package methylInheritance version 1.18.0 Index]