get_gxg_string {martini}R Documentation

Get STRING protein-protein interactions.

Description

Get all protein-protein interactions for an organism from STRING. It uses a score cut-off of 400.

Usage

get_gxg_string(organism = 9606)

Arguments

organism

Tax ID of the studied organism. The default is 9606 (human).

Value

A data.frame with two columns with pairs of interacting proteins.

Examples

# download frog interactions
## Not run: martini:::get_gxg_string(8364)

[Package martini version 1.14.0 Index]