check.geneid {loci2path}R Documentation

check compatibility of gene identifiers between eQTL set and gene set

Description

This function perform enrichment test between one eQTL set and one gene set

Usage

check.geneid(e.set, g.set)

Arguments

e.set

an eqtlSet object; the eQTL set to be queried against

g.set

an object of geneSet class; the gene set to be tested

Value

a data.frame shows the number of genes from (1) eqtl Set (2) gene Set (3) shared

Examples

check.geneid(eset.list$Skin, biocarta)

[Package loci2path version 1.14.0 Index]