SummarizedData {iteremoval}R Documentation

Summarized data

Description

RangedSummarizedExperiment object contains the probability data of the control and positive samples. It is the integration of SWRG0 and SWRG1. colData in SummarizedData contains a column 'Group' indicating normal(0) from malignant(1). In assay, column represents samples, row represents genome ranges related to a disease.

Usage

SummarizedData

Format

RangedSummarizedExperiment.

Details

We identified 299 genomic regions related to the methylation status of a disease. Then, we sequenced the cfDNA of 44 subjects. 22 were malignant, while others were normal. We built a statistical model to compute the probability of the disease for each region and subject, and this dataframe contains the probabilities of 299 regions and 44 samples.

See Also

Other data: SWRG0, SWRG1


[Package iteremoval version 1.14.0 Index]