counts {isomiRs} | R Documentation |
The counts slot holds the count data as a matrix of non-negative integer
count values, one row for each isomiR, and one
column for each sample. The normalized matrix
can be obtained by using the parameter norm=TRUE
.
counts.IsomirDataSeq(object, norm = FALSE) ## S4 method for signature 'IsomirDataSeq' counts(object, norm = FALSE) ## S4 replacement method for signature 'IsomirDataSeq,matrix' counts(object) <- value
object |
A |
norm |
Boolean, return log2-normalized counts. |
value |
An integer matrix. |
base::matrix with raw or normalized count data.
Lorena Pantano
data(mirData) head(counts(mirData))