HaploCode-class {inveRsion} | R Documentation |
The object stores the haplotype coding for each of the candidate brake-points. It is typically generated by calling the function codeHaplo
on a GenoDat
object.
Objects can be created by calls of codeHaplo(objectGenoDat, blockSize, minAllele, saveRes = TRUE, file = NULL, ROI)
haploCode
:Object of class "matrix"
Haplotype coding into decimal integers
blockSize
:Object of class "numeric"
block size of SNP used to identify the haplotype of each candidate brake-point.
minAllele
:Object of class "numeric"
minimum allele above which candidate brake-points are considered
signature(.Object = "HaploCode")
: Internal, users should use codeHaplo
signature(object = "HaploCode")
: shows HaploCode
Alejandro Caceres acaceres@creal.cat
data(gDat) hapCode <-codeHaplo(gDat,blockSize=3,minAllele=0.3,saveRes=FALSE) hapCode