geom_GC {ggmsa}R Documentation

geom_GC

Description

Multiple sequence alignment layer for ggplot2. It plot points of GC content.

Usage

geom_GC(show.legend = FALSE)

Arguments

show.legend

logical. Should this layer be included in the legends?

Value

a ggplot layer

Author(s)

Lang Zhou

Examples

#plot GC content
f <- system.file("extdata/LeaderRepeat_All.fa", package="ggmsa")
ggmsa(f, font = NULL, color="Chemistry_NT") + geom_GC()

[Package ggmsa version 1.0.0 Index]