readSSfile {ggmsa}R Documentation

readSSfile

Description

Read secondary structure file

Usage

readSSfile(file, type = NULL)

Arguments

file

A text file in connect format

type

file type. one of "Helix, "Connect", "Vienna" and "Bpseq"

Value

data frame

Author(s)

Lang Zhou

Examples

RF03120 <- system.file("extdata/Rfam/RF03120_SS.txt", package="ggmsa")
helix_data <- readSSfile(RF03120, type = "Vienna")

[Package ggmsa version 1.0.0 Index]