easyRNASeq RnaSeqParam accessors {easyRNASeq} | R Documentation |
These functions and generics define 'accessors' (to get and set values) for
RnaSeqParam
objects within the easyRNASeq package.
Implemented are:
annotParam
bamParam
countBy
datasource
paired
precision
stranded
strandProtocol
yieldSize
## S4 method for signature 'RnaSeqParam' yieldSize(object)
object |
An object derived from class |
The value of the corresponding slot.
Nicolas Delhomme
The AnnotParam
class
The BamParam
class
The RnaSeqParam
class
The BamParam yieldSize
accessor
## create the necessary AnnotParam annotParam <- AnnotParam( datasource=system.file( "extdata", "Dmel-mRNA-exon-r5.52.gff3", package="RnaSeqTutorial")) ## create the RnaSeqParam rsp <- RnaSeqParam(annotParam=annotParam) ## get the yieldSize Parameter ysize <-yieldSize(rsp)