extract_sets {decoupleR} | R Documentation |
Extracts feature sets from a renamed network (see rename_net).
extract_sets(network)
network |
Tibble or dataframe with edges and it's associated metadata. |
inputs_dir <- system.file("testdata", "inputs", package = "decoupleR") mat <- readRDS(file.path(inputs_dir, "input-expr_matrix.rds")) network <- readRDS(file.path(inputs_dir, "input-dorothea_genesets.rds")) network <- rename_net(network, tf, target, mor, likelihood) extract_sets(network)