ContigOrdering-class {contiBAIT} | R Documentation |
This class is a matrix of two character vectors that represent the calculated ordering of a linkage group. The first element of this matrix is the Linkage Group sub-setted by contigs with equal strand states across all libraries in the calculated order. The second element is the names of names of each contig in the calculated order.
ContigOrdering(ordering = character())
ordering |
a matrix of two character vectors that represent the calculated ordering of a linkage group. The first element of this matrix is the Linkage Group sub-setted by contigs with equal strand states across all libraries in the calculated order. The second element is the names of names of each contig in the calculated order. |
a ContigOrdering
thisOrdering <- ContigOrdering(matrix(ncol=2, c( "LG1.11", "chr2:1000820-2001640", "LG1.1", "chr2:3002461-4003281")))