read.gctx.ids {cmapR} | R Documentation |
Read GCTX row or column ids
read.gctx.ids(...) read_gctx_ids(gctx_path, dim = "row")
... |
arguments passed on to |
gctx_path |
path to the GCTX file |
dim |
which ids to read (row or column) |
a character vector of row or column ids from the provided file
Other GCTX parsing functions:
GCT
,
append.dim()
,
fix.datatypes()
,
parse.gctx()
,
process_ids()
,
read.gctx.meta()
,
write.gctx.meta()
,
write.gctx()
,
write.gct()
gct_file <- system.file("extdata", "modzs_n25x50.gctx", package="cmapR") # row ids rid <- read_gctx_ids(gct_file) head(rid) # column ids cid <- read_gctx_ids(gct_file, dim="column") head(cid)