importKnife {circRNAprofiler} | R Documentation |
The function importKnife is specifically designed to read and adapt the KNIFE v1.5 output file (circJuncProbs.txt). See https://github.com/lindaszabo/KNIFE.git for more details.
importKnife(pathToFile)
pathToFile |
A character string specifying the path to the file containing the detected circRNAs. |
A data frame.
# Path to an example file containing circRNAs detected by KNIFE pathToFile <- system.file("extdata", "knife/circRNAs_001.txt", package="circRNAprofiler") # Inner function. # Import circRNAs. importKnife(pathToFile)