varianceBeadStabiliseSingleArray {blima}R Documentation

Bead level VST.

Description

This function is not intended to direct use it takes single beadLevelData object and do bead level variance stabilisation.

Usage

varianceBeadStabiliseSingleArray(b, normalizationMod = NULL, 
    quality = "qua", channelInclude = "bgf", channelOutput = "vst")

Arguments

b

Object beadLevelData.

normalizationMod

NULL for normalization of all input b. Otherwise specifies logical vector of the length equals to the number of arrays in b.

quality

Quality to analyze, default is "qua".

channelInclude

This field allows user to set channel with weights which have to be in 0,1. All zero weighted items are excluded from t-test. You can turn this off by setting this NULL. This option may be used together with bacgroundCorrect method or/and with beadarray QC (defaults to "bgf").

channelOutput

Output from VST.

Author(s)

Vojtěch Kulvait


[Package blima version 1.28.0 Index]