impute_systematic_nondetects {autonomics}R Documentation

Impute systematic nondetects

Description

Impute systematic nondetects

Usage

impute_systematic_nondetects(
  object,
  subgroup = subgroup,
  fun = halfnormimpute,
  plot = TRUE,
  verbose = TRUE,
  ...
)

Arguments

object

SummarizedExperiment

subgroup

subgroup svar

fun

imputation function

plot

TRUE or FALSE

verbose

TRUE or FALSE

...

passed to 'fun'

Value

SummarizedExperiment

Examples

file <- download_data('fukuda20.proteingroups.txt')
object <- read_proteingroups(file, impute = FALSE, plot = FALSE)
impute_systematic_nondetects(object)

[Package autonomics version 1.2.0 Index]