log2transform {autonomics} | R Documentation |
Transform values
log2transform(object, verbose = FALSE) exp2(object, verbose = FALSE) zscore(object, verbose = FALSE) quantnorm(object, verbose = FALSE) invnorm(object, verbose = FALSE)
object |
SummarizedExperiment |
verbose |
TRUE or FALSE |
Transformed sumexp
require(magrittr) file <- download_data('fukuda20.proteingroups.txt') object <- read_proteingroups(file, plot=FALSE, impute=FALSE) object %>% plot_sample_densities() invnorm(object) %>% plot_sample_densities() object %>% plot_sample_densities() quantnorm(object) %>% plot_sample_densities() object %>% plot_sample_densities() zscore(object) %>% plot_sample_densities() object %>% plot_sample_densities() exp2(object) %>% plot_sample_densities() log2transform(exp2(object)) %>% plot_sample_densities()