guess_sep {autonomics} | R Documentation |
Guess separator
guess_sep(x, ...) ## S3 method for class 'character' guess_sep(x, separators = c(".", "_"), verbose = FALSE, ...) ## S3 method for class 'factor' guess_sep(x, ...) ## S3 method for class 'SummarizedExperiment' guess_sep(x, var = "sample_id", separators = c(".", "_"), verbose = FALSE, ...)
x |
character vector or SummarizedExperiment |
... |
used for proper S3 method dispatch |
separators |
character vector: possible separators to look for |
verbose |
TRUE or FALSE |
var |
svar or fvar |
separator (string) or NULL (if no separator could be identified)
# charactervector x <- c('PERM_NON.R1[H/L]', 'PERM_NON.R2[H/L]', 'PERM_NON.R3[H/L]') guess_sep(x) x <- c('WT untreated 1', 'WT untreated 2', 'WT treated 1') guess_sep(x) x <- c('group1', 'group2', 'group3.R1') guess_sep(x) # SummarizedExperiment # file <- download_data('halama18.metabolon.xlsx') # object <- read_metabolon(file, plot=FALSE) # guess_sep(object) # file <- download_data('billing16.proteingroups.txt') # object <- read_proteingroups(file, plot=FALSE) # guess_sep(object)