invert {autonomics}R Documentation

Invert

Description

For character vectors: invert collapsed strings. For SummarizedExperiments: invert expressions , subgroups, and sample ids

Usage

invert(x, ...)

## S3 method for class 'character'
invert(x, sep = guess_sep(x), ...)

## S3 method for class 'SummarizedExperiment'
invert(
  x,
  subgroups = slevels(x, "subgroup"),
  sep = guess_sep(x, "subgroup"),
  ...
)

Arguments

x

character vector or SummarizedExperiment

...

to enable S3 method dispatch

sep

string: collapsed string separator

subgroups

character vector: subgroup levels to be inversed

Value

character vector or SummarizedExperiment

Examples

# character
    x <- c('Ctrl_A', 'Ctrl_B')
    invert(x)

# SummarizedExperiment
    file <- download_data('fukuda20.proteingroups.txt')
    object <- read_proteingroups(file, plot=FALSE)
    invert(object)

[Package autonomics version 1.2.0 Index]