loadVariantExperiment {VariantExperiment} | R Documentation |
loadVariantExperiment to load the GDS back-end SummarizedExperiment object into R console.
loadVariantExperiment(dir = tempdir())
dir |
The directory to save the gds format of the array data, and the newly generated SummarizedExperiment object with array data in GDSArray format. |
An VariantExperiment
object.
gds <- SeqArray::seqExampleFileName("gds") ## ve <- makeVariantExperimentFromGDS(gds) ## ve1 <- subsetByOverlaps(ve, GRanges("22:1-48958933")) aa <- tempfile() ## saveVariantExperiment(ve1, dir=aa, replace=TRUE) ## loadVariantExperiment(dir = aa)