UMI4C2dds {UMI4Cats}R Documentation

UMI4Cats object to DDS object.

Description

Transforms an UMI4C object to a DDS object

Usage

UMI4C2dds(umi4c, design = ~condition)

Arguments

umi4c

UMI4C object as generated by makeUMI4C or the UMI4C constructor.

design

A formula or matrix. The formula expresses how the counts for each fragment end depend on the variables in colData. See DESeqDataSet.

Value

DDS object.


[Package UMI4Cats version 1.4.0 Index]