assayCollapsed {TimeSeriesExperiment}R Documentation

Collapsed data.

Description

Assay and colData collapsed over replicates. The values can be computed with set with collapseReplicates function.

Usage

assayCollapsed(object, ...)

## S4 method for signature 'TimeSeriesExperiment'
assayCollapsed(object)

assayCollapsed(object, ...) <- value

## S4 replacement method for signature 'TimeSeriesExperiment'
assayCollapsed(object) <- value

colDataCollapsed(object, ...)

## S4 method for signature 'TimeSeriesExperiment'
colDataCollapsed(object)

colDataCollapsed(object, ...) <- value

## S4 replacement method for signature 'TimeSeriesExperiment'
colDataCollapsed(object) <- value

Arguments

object

a TimeSeriesExperiment object.

...

argiments to other functions.

value

a numerical matrix

Value

a DataFrame

Examples

data("endoderm_small")
endoderm_small <- collapseReplicates(endoderm_small)
head(assayCollapsed(endoderm_small))

data("endoderm_small")
endoderm_small <- collapseReplicates(endoderm_small)
head(colDataCollapsed(endoderm_small))


[Package TimeSeriesExperiment version 1.12.0 Index]