decoyScoreTable {TargetDecoy} | R Documentation |
Prepare score table for decoys
Description
Takes an input object and returns a score table for the decoys.
Usage
decoyScoreTable(object, decoy, score, log10 = TRUE)
Arguments
object |
A data.frame , mzID or mzRident object.
|
decoy |
character , name of the variable that indicates if the peptide
matches to a target or to a decoy.
|
score |
numeric , indicating the score of the peptide match, obtained
by the search engine.
|
log10 |
logical to indicate if the score should be
-log10 -transformed.
|
Value
A data.frame
with a logical "decoy"
column and numeric "scores"
.
Author(s)
Elke Debrie, Lieven Clement
[Package
TargetDecoy version 1.0.0
Index]