tssObject {TSRchitect}R Documentation

tssObject

Description

S4 constructor function for tssObject

Usage

tssObject(
  title = NA,
  bamDataFirstRead = NA,
  bamDataLastRead = NA,
  bedData = NA
)

Arguments

title

'character' A short descriptive title for the experiment. Is set to NA by default.

bamDataFirstRead

'list' the name of a list of GAlignments objects (originating from .bam files) in the workspace. Set to NA by default.

bamDataLastRead

'list' the name of a list of GAlignments objects (originating from paired-read .bam files) in the workspace. Set to NA by default.

bedData

'list' the name of a list of GRanges or Pairs objects (originating from .bed files) in the workspace. Set to NA by default.

Value

a new tssObject is returned to the user's workspace.

Examples

new.tssObj <- tssObject(title="Example")


[Package TSRchitect version 1.20.0 Index]