matchedMetExp {TCGAbiolinks}R Documentation

Get GDC samples with both DNA methylation (HM450K) and Gene expression data from GDC databse

Description

For a given TCGA project it gets the samples (barcode) with both DNA methylation and Gene expression data from GDC database

Usage

matchedMetExp(project, legacy = FALSE, n = NULL)

Arguments

project

A GDC project

legacy

Access legacy (hg19) or harmonized database (hg38).

n

Number of samples to return. If NULL return all (default)

Value

A vector of barcodes

Examples

# Get ACC samples with both  DNA methylation (HM450K) and gene expression aligned to hg19
samples <- matchedMetExp("TCGA-UCS", legacy = TRUE)

[Package TCGAbiolinks version 2.22.4 Index]