getNETdata {StarBioTrek} | R Documentation |
getNETdata creates a data frame with network data. Network category can be filtered among: physical interactions, co-localization, genetic interactions and shared protein domain.
getNETdata(network, organismID = NULL)
network |
variable. The user can use the following parameters based on the network types to be used. PHint for Physical_interactions, COloc for Co-localization, GENint for Genetic_interactions and SHpd for Shared_protein_domains |
organismID |
organism==NULL default value is homo sapiens. |
list with gene-gene (or protein-protein interactions)
## Not run: organismID="Saccharomyces_cerevisiae" netw<-getNETdata(network="SHpd",organismID) ## End(Not run)