average {StarBioTrek}R Documentation

For TCGA data get human pathway data and creates a matrix with the average of genes for each pathway.

Description

average creates a matrix with a summarized value for each pathway

Usage

average(pathwayexpsubset)

Arguments

pathwayexpsubset

list of pathway data

Value

a matrix value for each pathway

Examples

list_path_gene<-GE_matrix(DataMatrix=Data_CANCER_normUQ_fil,genes.by.pathway=pathway[1:50])
score_mean<-average(pathwayexpsubset=list_path_gene)

[Package StarBioTrek version 1.20.0 Index]