listpathnet {StarBioTrek}R Documentation

Get human KEGG pathway data and the output of list_path_net define the common genes.

Description

listpathnet creates a list of interacting genes for each human pathway.

Usage

listpathnet(lista_net, pathway_exp)

Arguments

lista_net

output of path_net

pathway_exp

pathway data as provided by getKEGGdata

Value

a list of genes for each pathway (interacting genes belong to that pathway)

Examples

lista_network<-pathnet(genes.by.pathway=pathway[1:5],data=netw)
list_path<-listpathnet(lista_net=lista_network,pathway=pathway[1:5])

[Package StarBioTrek version 1.20.0 Index]