.makeServer {SpatialCPie} | R Documentation |
SpatialCPie server
Description
SpatialCPie server
Usage
.makeServer(assignments, clusterMeans, counts, scores, colors, image,
coordinates, featureName)
Arguments
assignments |
data.frame with cluster assignments
containing the columns "unit" (name of the observational unit; either a
gene name or a spot name), "resolution" , "cluster" , and "name" (a
unique identifier of the (resolution, cluster) pair).
|
clusterMeans |
data.frame with columns "name" ,
"resolution" , "cluster" , featureName , and "mean" .
|
scores |
data.frame with cluster scores for each
spot in each resolution containing the columns "spot" , "resolution" ,
"cluster" , "name" , and "score" .
|
colors |
vector of colors for each cluster. Names should match the
"name" columns of the assignments and scores .
|
image |
background image for the array plots, passed to
grid.raster .
|
coordinates |
data.frame with rownames matching
the names in scores and columns "x" and "y"
specifying the plotting position of each observation.
|
featureName |
character with the name of the
clustered feature.
|
Value
server function, to be passed to shinyApp
.
[Package
SpatialCPie version 1.10.0
Index]