get_homologs_besthits {STRINGdb} | R Documentation |
Returns the list of closest homologs (as measured by bitscore) of the given input identifiers in all STRING species or single target species.
## S4 method for signature 'STRINGdb' get_homologs_besthits(string_ids, target_species_id=NULL)
string_ids |
a vector of STRING identifiers. |
target_species_id |
NCBI taxonomy identifier of the species to query for homologs (the species must be present in the STRING database) |
Data frame containing the best blast hits x species of the given input identifiers.
Andrea Franceschini