renameRegions {SNPhood}R Documentation

Rename regions.

Description

renameRegions renames regions from a SNPhood object.

Usage

renameRegions(SNPhood.o, newRegionsMapping, verbose = TRUE)

Arguments

SNPhood.o

Object of class SNPhood

newRegionsMapping

Named list. For clarity of mapping, the names of the list must be the currently defined region names, and the values of each element the corresponding new ones.

verbose

Logical(1). Default TRUE. Should the verbose mode (i.e., diagnostic messages during execution of the script) be enabled?

Value

An object of class SNPhood with the requested regions being renamed

See Also

renameBins, renameDatasets, renameReadGroups

Examples

data(SNPhood.o, package="SNPhood")
mapping = as.list(paste0(annotationRegions(SNPhood.o),".newName"))
names(mapping) = annotationRegions(SNPhood.o)
SNPhood_mod.o = renameRegions(SNPhood.o, mapping)

[Package SNPhood version 1.24.0 Index]