SIMLR_Feature_Ranking {SIMLR} | R Documentation |
perform the SIMLR feature ranking algorithm. This takes as input the original input data and the corresponding similarity matrix computed by SIMLR
SIMLR_Feature_Ranking(A, X)
A |
an (n x n) similarity matrix by SIMLR |
X |
an (m x n) data matrix of gene expression measurements of individual cells |
a list of 2 elements: pvalues and ranking ordering over the n covariates as estimated by the method
data(BuettnerFlorian) SIMLR_Feature_Ranking(A = BuettnerFlorian$results$S, X = BuettnerFlorian$in_X)