selex.countSummary {SELEX} | R Documentation |
This function returns the sample, kmer length, offset, minimum/maximum count, total count, and applied filters for either all count tables or a specified sample in the current working directory.
selex.countSummary(sample=NULL, displayFilter=FALSE)
sample |
A sample handle to the sample for which K-mer count statistics should be returned. |
displayFilter |
Display all applied sequence filter attributes. |
Minimum count refers to the lowest count observed for a kmer of length k for a given sample. Total count is the sum of counts over all kmers of length k for a given sample.
selex.countSummary
returns a data frame containing the sample, kmer length, offset, minimum/maximum count, total count, and applied filters for all count tables in the current working directory. If sample
is provided, the above information is given for the specific sample only.
selex.countSummary()