auto.select.rank.cut {RnBeads}R Documentation

auto.select.rank.cut

Description

automatically select a rank cutoff for given ranks and p-values current implementation: sort the p-values according to rank. select as rank cutoff the rank for which the worst (i.e. max) p-value in the top list is still smaller than the best (i.e. min) p-value of the group of worst-ranking p-values of equal size as the top-list

Usage

auto.select.rank.cut(p, r, alpha = 0.1)

Arguments

p

vector of p-values

r

vector of ranks

alpha

the percentile to select the top and bottom part of the list

Value

the maximum rank fulfilling the criterion

Author(s)

Fabian Mueller


[Package RnBeads version 2.12.2 Index]