rnb.beta2mval {RnBeads} | R Documentation |
rnb.beta2mval
Description
Transforms beta values to M values, adjusting for +infinity and -infinity.
Usage
rnb.beta2mval(betas, epsilon = 1e-05)
Arguments
betas |
numeric vector or matrix of beta values to be transformed.
|
epsilon |
Single numeric in the range [0, 0.5], giving the threshold of beta values to use when
adjusting for potential M values close to +infinity or -infinity. Setting this parameter to 0 (zero)
disables stabilization; in which case M values of -infinity or +infinity could be returned.
|
Value
The calculated and adjusted M values.
Author(s)
Fabian Mueller
Examples
library(RnBeads.hg19)
data(small.example.object)
logger.start(fname=NA)
mvals <- rnb.beta2mval(meth(rnb.set.example))
summary(mvals)
[Package
RnBeads version 2.12.2
Index]