getSpecies {ReactomeContentService4R}R Documentation

Species queries

Description

This method retrieves the list of all or main species in Reactome knowledgebase.

Usage

getSpecies(main = FALSE)

Arguments

main

determine whether return main species, which are those have either manually curated or computationally inferred pathways

Value

a dataframe of species information

See Also

Other getContent: getEntities(), getEventsHierarchy(), getOrthology(), getParticipants(), getPathways(), getPerson(), getSchemaClass(), query()

Examples

# get a list of main species
getSpecies(main=TRUE)

[Package ReactomeContentService4R version 1.2.0 Index]