enrichmentPValue_R_Backend {RVS}R Documentation

R backend for enrichmentPValue calculation

Description

R backend for enrichmentPValue calculation

Usage

enrichmentPValue_R_Backend(
  snpMat,
  famIds,
  sharingProbs,
  minorAllele,
  threshold = 0
)

Arguments

snpMat

SnpMatrix

famIds

family ids corresponding to rows of the snpMap

sharingProbs

vector of sharing probabilites, must be a named vector with famid's for each probability

minorAllele

which variant value to count as the minor allele

threshold

minimum p-value threshold passed to multipleFamilyPValue

Value

p-value


[Package RVS version 1.16.0 Index]