probe.performance {RPA}R Documentation

Probe performance

Description

Provide a table of probe-level parameter estimates (affinity and stochastic noise) for RPA output.

Usage

probe.performance(probe.parameters, abatch, sets = NULL)

Arguments

probe.parameters

List with affinities and variances for the probesets

abatch

Affybatch used in the analysis

sets

Specify the probesets to include in the output. Default: All probesets

Value

Data frame of probe-level parameter estimates

Author(s)

Leo Lahti leo.lahti@iki.fi

References

See citation("RPA")

Examples

## Not run: 
  library(affydata); 
  data(Dilution); 
  rpa.results <- rpa.complete(Dilution); 
  tab <- probe.parameters(rpa.results); 
  df <- df[order(abs(df$tau2), decreasing = TRUE),]

## End(Not run)

[Package RPA version 1.50.0 Index]