SequenceModDNAStringSetTrack-class {RNAmodR} | R Documentation |
A Gviz
compatible
SequenceTrack
for showing modified
DNA sequences.
ModDNASequenceTrack(sequence, chromosome, genome, name = "SequenceTrack", ...) ## S4 method for signature 'SequenceModDNAStringSetTrack' seqnames(x) ## S4 method for signature 'SequenceModDNAStringSetTrack' seqlevels(x)
sequence |
A |
chromosome, genome, name, ... |
See
|
x |
A |
a SequenceModDNAStringSetTrack
object
sequence
A ModDNAStringSet
object
seq <- ModDNAStringSet(c(chr1 = paste0(alphabet(ModDNAString()), collapse = ""))) st <- ModDNASequenceTrack(seq) Gviz::plotTracks(st, chromosome = "chr1",from = 1L, to = 20L)