setNodeFillOpacityMapping {RCy3} | R Documentation |
Sets opacity for node fill only.
setNodeFillOpacityMapping( table.column, table.column.values = NULL, opacities = NULL, mapping.type = "c", default.opacity = NULL, style.name = NULL, network = NULL, base.url = .defaultBaseUrl )
table.column |
Name of Cytoscape table column to map values from |
table.column.values |
List of values from Cytoscape table to be used in mapping. Leave NULL to perform an automatic mapping to all column values. |
opacities |
(integer) values between 0 and 255; 0 is invisible. A range of 50 to 255 is used by default for automatic mapping. |
mapping.type |
(char) continuous, discrete or passthrough (c,d,p); default is continuous |
default.opacity |
Opacity value to set as default for all unmapped values |
style.name |
Name of style; default is "default" style |
network |
(optional) Name or SUID of the network. Default is the "current" network active in Cytoscape. |
base.url |
(optional) Ignore unless you need to specify a custom domain, port or version to connect to the CyREST API. Default is http://localhost:1234 and the latest version of the CyREST API supported by this version of RCy3. |
None
setNodeFillOpacityMapping('score') setNodeFillOpacityMapping('score', opacities=c(0,100)) setNodeFillOpacityMapping('score', c(-5,5), c(50,255))