getOmaMembers {PhyloProfile}R Documentation

Get OMA members

Description

Get OMA ortholog group, OMA HOG or OMA pair's members for a seed protein from OMA Browser.

Usage

getOmaMembers(id = NULL, orthoType = "OG")

Arguments

id

ID of the seed protein (OMA or UniProt ID)

orthoType

type of OMA orthologs: either "HOG", "OG" (orthologous group) or "PAIR" (orthologous pair - CURRENTLY NOT WORKING). Default = "OG".

Value

List of OMA orthologs for an input seed protein.

Author(s)

Carla Mölbert carla.moelbert@gmx.de

Examples

print("Uncomment the following line to run the function")
# getOmaMembers("HUMAN29397", "OG")

[Package PhyloProfile version 1.8.6 Index]