logNormPvalSequenceSet {PWMEnrich}R Documentation

Lognormal P-value for a set of sequences

Description

Lognormal P-value for a set of sequences

Usage

logNormPvalSequenceSet(scores, seq.len, pwm.len, bg.mean, bg.sd, bg.len)

Arguments

scores

a matrix of per-sequence affinity scores

seq.len

lengths of sequences

pwm.len

lengths of pwms

bg.mean

mean background at length of bg.len

bg.sd

standard deviation of background at length of bg.len

bg.len

the length for which mean and sd are calculated

Value

P-value


[Package PWMEnrich version 4.30.0 Index]