cutoffZscore {PWMEnrich}R Documentation

Z-score calculation for cutoff hits

Description

The Z-score is calculated separately for each sequence

Usage

cutoffZscore(scores, seq.len, pwm.len, bg.P)

Arguments

scores

the hit counts for the sequences

seq.len

the length distribution of sequences

pwm.len

the length distribution of the PWMs

bg.P

background probabilities of observing a motif hit at nucleotide resolution (scaled to sequence length, not 2 * length)

Value

Z-score


[Package PWMEnrich version 4.30.0 Index]