ramilowski_download {OmnipathR} | R Documentation |
Curated ligand-receptor pairs from Supplementary Table 2 of the article "A draft network of ligand-receptor mediated multicellular signaling in human" (https://www.nature.com/articles/ncomms8866).
ramilowski_download()
A data frame (tibble) with interactions.
rami_interactions <- ramilowski_download() rami_interactions # # A tibble: 2,557 x 16 # Pair.Name Ligand.Approved. Ligand.Name Receptor.Approv. # <chr> <chr> <chr> <chr> # 1 A2M_LRP1 A2M alpha-2-ma. LRP1 # 2 AANAT_MT. AANAT aralkylami. MTNR1A # 3 AANAT_MT. AANAT aralkylami. MTNR1B # 4 ACE_AGTR2 ACE angiotensi. AGTR2 # 5 ACE_BDKR. ACE angiotensi. BDKRB2 # # . with 2,547 more rows, and 12 more variables: Receptor.Name <chr>, # # DLRP <chr>, HPMR <chr>, IUPHAR <chr>, HPRD <chr>, # # STRING.binding <chr>, STRING.experiment <chr>, HPMR.Ligand <chr>, # # HPMR.Receptor <chr>, PMID.Manual <chr>, Pair.Source <chr>, # # Pair.Evidence <chr>