bioplex1 {OmnipathR} | R Documentation |
This dataset contains ~24,000 interactions detected in HEK293T cells using 2,594 baits. More details at https://bioplex.hms.harvard.edu/interactions.php.
bioplex1()
Data frame (tibble) with interactions.
bioplex_interactions <- bioplex1() nrow(bioplex_interactions) # [1] 23744 colnames(bioplex_interactions) # [1] "GeneA" "GeneB" "UniprotA" "UniprotB" # [5] "SymbolA" "SymbolB" "p_wrong" "p_no_interaction" # [9] "p_interaction"