computeLatentSpace {OUTRIDER}R Documentation

Extracting the latent space

Description

Extracts the latent space from the OutriderDataSet object determined by the autoencoder.

Usage

computeLatentSpace(ods)

Arguments

ods

An OutriderDataSet

Value

A matrix containing the latent space determined by the autoencoder.

Examples

ods <- makeExampleOutriderDataSet()

ods <- estimateSizeFactors(ods)
ods <- controlForConfounders(ods, implementation="pca")
computeLatentSpace(ods)[,1:6]


[Package OUTRIDER version 1.12.0 Index]