flagSamplesTech,RccSet-method {NanoStringQCPro}R Documentation

flagSamplesTech

Description

Flag samples based on their technical performance, i.e. field of vision (FOV) counted and binding density

Usage

## S4 method for signature 'RccSet'
flagSamplesTech(rccSet)

Arguments

rccSet

An RccSet object

Details

Samples with a FOV counted/FOV count of less than 80

Value

A numeric vector giving the indices of samples with outlier values in FOV counted and binding density < 0.05 or > 2.25 (thresholds defined by NanoString) will be flagged.

Author(s)

Dorothee Nickles


[Package NanoStringQCPro version 1.26.0 Index]