explained_varPlot {MultiBaC} | R Documentation |
explained_varPlot
explained_varPlot(mbac, ...)
mbac |
Object of class mbac generated by *ARSyNbac*, *MultiBaC* or *batchCorrection*. |
... |
Other graphical parameters. |
Explained variance plot for ARSyN models is displayed.
data('multiyeast') my_mbac <- createMbac (inputOmics = list(A.rna, A.gro, B.rna, B.ribo, C.rna, C.par), batchFactor = c("A", "A", "B", "B", "C", "C"), experimentalDesign = list("A" = c("Glu+", "Glu+", "Glu+", "Glu-", "Glu-", "Glu-"), "B" = c("Glu+", "Glu+", "Glu-", "Glu-"), "C" = c("Glu+", "Glu+", "Glu-", "Glu-")), omicNames = c("RNA", "GRO", "RNA", "RIBO", "RNA", "PAR")) my_final_mbac <- MultiBaC (my_mbac, test.comp = NULL, scale = FALSE, center = TRUE, crossval = NULL, Variability = 0.90, Interaction = TRUE , showplot = FALSE, showinfo = FALSE) explained_varPlot (my_final_mbac)