ModStringSet-io {Modstrings} | R Documentation |
Functions to read/write an ModStringSet object from/to a file.
readModDNAStringSet( filepath, format = "fasta", nrec = -1L, skip = 0L, seek.first.rec = FALSE, use.names = TRUE, with.qualities = FALSE ) readModRNAStringSet( filepath, format = "fasta", nrec = -1L, skip = 0L, seek.first.rec = FALSE, use.names = TRUE, with.qualities = FALSE ) writeModStringSet( x, filepath, append = FALSE, compress = FALSE, compression_level = NA, format = "fasta", ... )
filepath, format, nrec, skip, seek.first.rec, use.names, with.qualities, append, compress, compression_level, ... |
See |
x |
A |
A ModStringSet
of the defined type.
seqs <- paste0(paste(alphabet(ModDNAString()), collapse = ""), c("A","G","T")) seqs set <- ModDNAStringSet(seqs) set file <- tempfile() writeModStringSet(set, file) read <- readModDNAStringSet(file) read