scoreMetaClusters {MetaNeighbor}R Documentation

Summarize meta-cluster information in a table.

Description

Summarize meta-cluster information in a table.

Usage

scoreMetaClusters(meta_clusters, best_hits, outlier_label = "outliers")

Arguments

meta_clusters

Meta-cluster list generated by extractMetaClusters.

best_hits

Matrix of AUROCs used to extract meta-clusters.

outlier_label

Element of meta-cluster list containing outlier clusters.

Value

A data.frame. Column "meta_cluster" contains meta-cluster names, "clusters" lists the clusters belonging to each meta-cluster, "n_studies" is the number of studies spanned by the meta-cluster, "score" is the average similarity between meta-cluster members (average AUROC, NAs are treated as 0).


[Package MetaNeighbor version 1.14.0 Index]