markerFinder {MetaCyto}R Documentation

Find markers in a flow frame object

Description

A function that finds markers in a flow frame object.

Usage

markerFinder(fcsFrame)

Arguments

fcsFrame

A flow frame object.

Details

If the antibody name is available, the antibody name will be returned, otherwise, the channel name will be returned.

Value

Returns a vector of markers.

Examples

library(flowCore)
files=system.file("extdata","SDY420/ResultFiles/CyTOF_result",
                  package="MetaCyto")
files=list.files(files,pattern="fcs$",full.names=TRUE)[1]
fcs = read.FCS(files)
markers = markerFinder(fcs)

[Package MetaCyto version 1.16.0 Index]