MSstatsSampleSize {MSstatsSampleSize}R Documentation

MSstatsSampleSize: A package for optimal design of high-dimensional MS-based proteomics experiment

Description

A set of functions for sample size calculation. The packages estimates the variance in the input protein abundance data and simulates data with pre-defined number of biological replicates based on the variance estimation. It reports the mean predictive accuracy of the classifier and mean protein importance over multiple iterations of the simulation.

functions


[Package MSstatsSampleSize version 1.8.0 Index]