getInputFile {MSstatsConvert} | R Documentation |
MSstatsInputFiles
class.Get one of files contained in an instance of MSstatsInputFiles
class.
getInputFile(msstats_object, file_type) ## S4 method for signature 'MSstatsInputFiles' getInputFile(msstats_object, file_type = "input")
msstats_object |
object that inherits from |
file_type |
character name of a type file. Usually equal to "input". |
data.table
data.table
evidence_path = system.file("tinytest/raw_data/MaxQuant/mq_ev.csv", package = "MSstatsConvert") pg_path = system.file("tinytest/raw_data/MaxQuant/mq_pg.csv", package = "MSstatsConvert") evidence = read.csv(evidence_path) pg = read.csv(pg_path) imported = MSstatsImport(list(evidence = evidence, protein_groups = pg), "MSstats", "MaxQuant") class(imported) head(getInputFile(imported, "evidence"))