MSnbaseOptions {MSnbase}R Documentation

MSnbase options

Description

MSnbase defined a few options globally using the standard R options mechanism. The current values of these options can be queried with MSnbaseOptions. The options are:

Usage

MSnbaseOptions()

isMSnbaseVerbose()

setMSnbaseVerbose(opt)

setMSnbaseParallelThresh(opt = 1000)

setMSnbaseFastLoad(opt = TRUE)

isMSnbaseFastLoad()

Arguments

opt

The value of the new option

Details

isMSnbaseVerbose is one wrapper for the verbosity flag, also available through options("MSnbase")$verbose.

There are also setters to set options individually. When run without argument, the verbosity setter inverts the current value of the option.

Value

A list of MSnbase options and the single option values for the individual accessors.


[Package MSnbase version 2.20.1 Index]