mergeGenomicSaturation {MOMA}R Documentation

mergeGenomicSaturation Create data frame from coverage data, including number of total events 'covered' and unique events

Description

mergeGenomicSaturation Create data frame from coverage data, including number of total events 'covered' and unique events

Usage

mergeGenomicSaturation(coverage.range, topN)

Arguments

coverage.range

List indexed by sample, then sub-indexed by # of master regulators, then by event type (mut/amp/del/fus). Holds all events by sample

topN

Maximum number of master regulators to compute coverage

Value

A data frame with summary statistics for genomic saturation at each k


[Package MOMA version 1.6.0 Index]