qtlVennPlot {MAGAR} | R Documentation |
This function creates a venn plot from a list of methQTL results, showing the overlap between the interactions
qtlVennPlot( meth.qtl.result.list, out.folder, type = "SNP", out.name = NULL, ... )
meth.qtl.result.list |
A named list with each entry being an object of type |
out.folder |
Required argument specifying the location to store the resulting plot |
type |
Determines if either the SNP (default), the CpG, or the correlation block
|
out.name |
Optional argument for the name of the plot on disk (ending needs to be .png) |
... |
Further argument passed to |
The plot can be stored on disk using out.folder
and out.name
None
Michael Scherer
meth.qtl.res.1 <- loadMethQTLResult(system.file("extdata","MethQTLResult_chr18",package="MAGAR")) meth.qtl.res.2 <- meth.qtl.res.1 qtlVennPlot(list(A=meth.qtl.res.1,B=meth.qtl.res.2),out.folder=getwd())